The detailed information of tRNA gene sequence


Sequence ID>WENV183724888
Genome IDPJQE01091281
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 171
End posion on genome 87
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtcgttcgc
tRNA gene sequence 
GGAGAGTTGGCAGAATGGCTATTGCACCGGTCTTGAAAACCGGCGTCCGAAAGGGCATGG
GGGTTCGAATCCCTCACTCTCCGCCt
Downstream region at tRNA end position 
tcctggaaat
Secondary structure (Cloverleaf model)
>WENV183724888	Ser	TGA
                   c      GCCt tcctggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T A A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      T A          A     CGTCCGAAAGGGCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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