The detailed information of tRNA gene sequence


Sequence ID>WENV183724890
Genome IDPJQE01091486
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 396
End posion on genome 307
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctcgaccgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGGCAGACTCGAAATCTGTTGTACGGTTATCCGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgcaaagttt
Secondary structure (Cloverleaf model)
>WENV183724890	Ser	CGA
                   c      GCCA tgcaaagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTACGGTTATCCGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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