The detailed information of tRNA gene sequence


Sequence ID>WENV183724986
Genome IDPJQE01115886
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 349
End posion on genome 260
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacacggcgc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTTAAGGAGCACGCTTGGAAAGCGTGTGTTGGGGAAACTCAA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttccttggat
Secondary structure (Cloverleaf model)
>WENV183724986	Ser	GGA
                   c      GCCA ttccttggat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTTGGGGAAACTCAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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