The detailed information of tRNA gene sequence


Sequence ID>WENV183725071
Genome IDPJQE01144121
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 220
End posion on genome 296
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aagatgattc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAACCCCCGCAACCA
Downstream region at tRNA end position 
tgggcgcttt
Secondary structure (Cloverleaf model)
>WENV183725071	fMet	CAT
                   c      ACCA tgggcgcttt
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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