The detailed information of tRNA gene sequence


Sequence ID>WENV183725102
Genome IDPJQE01153244
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 416
End posion on genome 322
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcatcccagc
tRNA gene sequence 
GGGAGTGGTTGGGTGCTGGTGTGCCCCCTGGTCTTCAAAACCAGTGTGGCCTTCACAAGG
GGCCGGGTGGGTTCGATTCCTACACATTCCCGCCA
Downstream region at tRNA end position 
acccatcggc
Secondary structure (Cloverleaf model)
>WENV183725102	SeC	TCA
                   c      GCCA acccatcggc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G   A          T T
                    T     C A T C C     A
      T C G        T      | | + | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          C     TGTGGCCTTCACAAGGGGCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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