The detailed information of tRNA gene sequence


Sequence ID>WENV183725116
Genome IDPJQE01158007
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 206
End posion on genome 109
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gattgagcgc
tRNA gene sequence 
GGAGGCGCATGGGGCCTGGTGGTTCTCGCGGGCTTCAAACCCGTTGCGGGCCGTCGAAAG
GCGGCCTGGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
ggaattatta
Secondary structure (Cloverleaf model)
>WENV183725116	SeC	TCA
                   c      GCCA ggaattatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G G       G T G G G     C
    G       + + | +                 T T
    T       T T C T
      G G          C     TGCGGGCCGTCGAAAGGCGGCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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