The detailed information of tRNA gene sequence


Sequence ID>WENV183725136
Genome IDPJQE01165184
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 166
End posion on genome 256
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgcccttc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCGAAGGCGCACCCCTGCTAAGGGTGTATGGGTCAAAAGCCC
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
attatcattt
Secondary structure (Cloverleaf model)
>WENV183725136	Ser	GCT
                   c      GCCA attatcattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATGGGTCAAAAGCCCATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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