The detailed information of tRNA gene sequence


Sequence ID>WENV183725145
Genome IDPJQE01170108
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 307
End posion on genome 401
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gagacaaaac
tRNA gene sequence 
GGAAGGGAATCGTCCCCGGTGGGGCGGCCGGACTTCAAACCCGGTTGGGGCCGCTTGCGG
TCCTGTGTGGGTTCGACTCCCACTCTCTTCCGCCA
Downstream region at tRNA end position 
actctccacc
Secondary structure (Cloverleaf model)
>WENV183725145	SeC	TCA
                   c      GCCA actctccacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGGGCCGCTTGCGGTCCTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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