The detailed information of tRNA gene sequence


Sequence ID>WENV183725170
Genome IDPJQE01181792
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 162
End posion on genome 248
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccccggacga
tRNA gene sequence 
GGACAGGTGTCCGAGTGGCTGAAGGAGCCGGTCTCGAAAACCGGTATACCCGCAAGGGTA
TCGTGGGTTCGAATCCCACCCTGTCCGtag
Downstream region at tRNA end position 
gccgtgagcc
Secondary structure (Cloverleaf model)
>WENV183725170	Ser	CGA
                   a      Gtag gccgtgagcc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATACCCGCAAGGGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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