The detailed information of tRNA gene sequence


Sequence ID>WENV183725235
Genome IDPJQE01209677
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 169
End posion on genome 79
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gccatctcgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGCCATACCGGCGCGGACTCGAAATCCGTTGGGGGCGTAAGCTC
CACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttcctcgttc
Secondary structure (Cloverleaf model)
>WENV183725235	Ser	CGA
                   c      GCCA ttcctcgttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  C           | | |                 T T
  C         C C G G
    A T A          C     TGGGGGCGTAAGCTCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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