The detailed information of tRNA gene sequence


Sequence ID>WENV183725261
Genome IDPJQE01216676
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 259
End posion on genome 349
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggcaatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
tctcctagtt
Secondary structure (Cloverleaf model)
>WENV183725261	Ser	GGA
                   c      GCCA tctcctagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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