The detailed information of tRNA gene sequence


Sequence ID>WENV183725277
Genome IDPJQE01221052
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 247
End posion on genome 152
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacgcgtcac
tRNA gene sequence 
GGAGAAGGATGGGGCCCGGTGGCCCCACCGGTCTTCAAAACCGAGTTGCGTGGTTTAACA
CTGCGCGGATGGTTCGACTCCATCCCTTCTCCGCCA
Downstream region at tRNA end position 
tactattatt
Secondary structure (Cloverleaf model)
>WENV183725277	SeC	TCA
                   c      GCCA tactattatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T A C C     A
      C C C        T      | | | | |     G
    G       G G G G       G A T G G     C
    G       | | | |                 T T
    T       C C C C
      G G          A     GTTGCGTGGTTTAACACTGCGCG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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