The detailed information of tRNA gene sequence


Sequence ID>WENV183725278
Genome IDPJQE01221086
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 252
End posion on genome 343
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcacgcccT
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACCGGTTTGCTAAACCGGCATACGGGGTCAACCT
GTATCGAGGGTTCGAATCCCTCCGTCTCCGTga
Downstream region at tRNA end position 
taagcgcaga
Secondary structure (Cloverleaf model)
>WENV183725278	Ser	GCT
                   T      GTga taagcgcaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGGGGTCAACCTGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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