The detailed information of tRNA gene sequence


Sequence ID>WENV183725307
Genome IDPJQE01229364
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 164
End posion on genome 88
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atcttcaatt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCCCCCGCAACCA
Downstream region at tRNA end position 
gccatgttct
Secondary structure (Cloverleaf model)
>WENV183725307	fMet	CAT
                   t      ACCA gccatgttct
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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