The detailed information of tRNA gene sequence


Sequence ID>WENV183725319
Genome IDPJQE01234620
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 247
End posion on genome 341
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgcggcccct
tRNA gene sequence 
GGAAGTGTTTGCACCTCTGGTGAGGGCCACGGTCTTCAAAACCGTCGTGGGGTTTGAACA
AAGCTCCAAGTGGGTTCGATTCCCATACACTTCCGtct
Downstream region at tRNA end position 
cgaacgagct
Secondary structure (Cloverleaf model)
>WENV183725319	SeC	TCA
                   t      Gtct cgaacgagct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    T     T A C C C     A
      C T C        T      + | | | |     G
    T       C A C G       G T G G G     C
    G       |   | |                 T T
    G       G G G C
      T G A        C     CGTGGGGTTTGAACAAAGCTCCAA
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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