The detailed information of tRNA gene sequence


Sequence ID>WENV183725343
Genome IDPJQE01251157
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 130
End posion on genome 41
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagtcgctgc
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTCGATGGCGGCGGTCTTGAAAACCGCTGTGCCCGGAAGGGCA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
actccgcgac
Secondary structure (Cloverleaf model)
>WENV183725343	Ser	TGA
                   c      GCCA actccgcgac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TGTGCCCGGAAGGGCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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