The detailed information of tRNA gene sequence


Sequence ID>WENV183725375
Genome IDPJQE01260177
Search identical group
Phylum/Class[PJQE] biofilm metagenome; untreated reverse osmosis biofouled membrane
Species
Start position on genome 311
End posion on genome 224
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgctcgactt
tRNA gene sequence 
GGAGGGCTAGCCTAACTGGGAAGGCAGGAGCCTTGAAAGCTCCCGGGCGTTCGCGCCTTT
GGGGGTTCGAATCCCTCGCCCTCCGCCA
Downstream region at tRNA end position 
acctctatgg
Secondary structure (Cloverleaf model)
>WENV183725375	Ser	TGA
                   t      GCCA acctctatgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       T C C G       G G G G G     C
    G       | | | |                 T T
    G       A G G C
      G A          A     CGGGCGTTCGCGCCTTT
                    G - C
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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