The detailed information of tRNA gene sequence


Sequence ID>WENV183725478
Genome IDPJQF01000123
Search identical group
Phylum/Class[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
Species
Start position on genome 47989
End posion on genome 47913
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgtgttacgc
tRNA gene sequence 
GCAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTGCGCCA
Downstream region at tRNA end position 
tatttgcttc
Secondary structure (Cloverleaf model)
>WENV183725478	Asp	GTC
                   c      GCCA tatttgcttc
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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