The detailed information of tRNA gene sequence


Sequence ID>WENV183725766
Genome IDPJQF01014177
Search identical group
Phylum/Class[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
Species
Start position on genome 397
End posion on genome 307
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcgtgttgc
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATACCTCATAAGGGT
ATCGGGGGTTCGAATCCCCCCTTCACCGCCA
Downstream region at tRNA end position 
ttattcgctt
Secondary structure (Cloverleaf model)
>WENV183725766	Ser	GCT
                   c      GCCA ttattcgctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACCTCATAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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