The detailed information of tRNA gene sequence


Sequence ID>WENV183725819
Genome IDPJQF01020649
Search identical group
Phylum/Class[PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm
Species
Start position on genome 520
End posion on genome 430
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtgcatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
tttaacccta
Secondary structure (Cloverleaf model)
>WENV183725819	Ser	GGA
                   c      GCCA tttaacccta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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