The detailed information of tRNA gene sequence


Sequence ID>ENV08000959
Genome IDABMN01084275
Search identical group
Phylum/Classmarine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands)
Species
Start position on genome 6
End posion on genome 83
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnntttttG
tRNA gene sequence 
GGTCCTTTAGTTCAGTTGGTCAGAGCACCCCGCTCATAACGGGAGAGTCGTCGGTTCAAG
TCCGACAAGGCCCACCA
Downstream region at tRNA end position 
tttaacaata
Secondary structure (Cloverleaf model)
>ENV08000959	Met	CAT
                   G      ACCA tttaacaata
                     G - C
                     G - C
                     T   C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    T       C T T G       G T C G G     C
    G       | | + |                 T T
    G       G A G C
      T C A        A     GAGTC
                    C   A
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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