The detailed information of tRNA gene sequence


Sequence ID>ENV08000962
Genome IDABMN01087913
Search identical group
Phylum/Classmarine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands)
Species
Start position on genome 23
End posion on genome 104
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gtcggcatta
tRNA gene sequence 
GGGTAAGTGTCCGAGTGGTTAAAGGAGACGGACTGTAAATCCGTTGGCTCTGCCTACGTT
GGTTCAAATCCAACCTTGCCCAttc
Downstream region at tRNA end position 
taaatacnnn
Secondary structure (Cloverleaf model)
>ENV08000962	Tyr	GTA
                   a      Attc taaatacnnn
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     A - T
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    G       G C C T       G T T G G     C
    G         | | |                 T T
    T       A G G A
      T A A        G     TGGCTCTGCCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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