The detailed information of tRNA gene sequence


Sequence ID>WENV183727661
Genome IDPJTP01000066
Search identical group
Phylum/Class[PJTP] soil metagenome; Soil (3) enriched on wood chips: alkali lignin treatment
Species
Start position on genome 2143
End posion on genome 2216
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctactaagat
tRNA gene sequence 
CGCGAGGTGGAGCAGTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCGGTTCGAGT
CCGGTCCTCGCTACta
Downstream region at tRNA end position 
ggcaaaggag
Secondary structure (Cloverleaf model)
>WENV183727661	fMet	CAT
                   t      ACta ggcaaaggag
                     C   T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T G G C C     A
      T G A        G      | + | | |     G
    A       C G A G       A T C G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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