The detailed information of tRNA gene sequence


Sequence ID>ENV08000970
Genome IDABMN01130975
Search identical group
Phylum/Classmarine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands)
Species
Start position on genome 30
End posion on genome 102
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttacattcat
tRNA gene sequence 
GTCCCCATCGTCTAATGGCTTAGGACGGCTGTTTTTCAGGCAGCTTATCTCGGTTCGAAT
CCGGGTGGGGGATgct
Downstream region at tRNA end position 
atcaannnnn
Secondary structure (Cloverleaf model)
>ENV08000970	Glu	TTC
                   t      Tgct atcaannnnn
                     G   A
                     T + G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
      T A A        C      | + | | |     G
    G       T C T G       C T C G G     C
    G       + | | |                 T T
    C       G G A C
      T T A        G     TTAT
                    G - C
                    C - G
                    T - A
                    G - C
                    T + G
                  T       G
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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