The detailed information of tRNA gene sequence


Sequence ID>WENV183729038
Genome IDPJTQ01002943
Search identical group
Phylum/Class[PJTQ] soil metagenome; Soil (3) enriched on wood chips
Species
Start position on genome 2402
End posion on genome 2312
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgggcatgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAAAACCGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
cctagtctcc
Secondary structure (Cloverleaf model)
>WENV183729038	Ser	GGA
                   c      GCCA cctagtctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGCAAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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