The detailed information of tRNA gene sequence


Sequence ID>ENV08000982
Genome IDABMN01168259
Search identical group
Phylum/Classmarine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands)
Species
Start position on genome 88
End posion on genome 11
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaaatatcg
tRNA gene sequence 
GGAACATTAGCACAGTCAGGTTAGTGCGCTCGGCTCATAACCGAGTGGTCGTAGGTTCAA
ATCCTACCTGTTCCACTA
Downstream region at tRNA end position 
tcataacaaa
Secondary structure (Cloverleaf model)
>ENV08000982	Met	CAT
                   g      ACTA tcataacaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     A - T
                     T   C          T A
                    T     C A T C C     A
    C T G A        A      | | | | |     A
  A         C A C G       G T A G G     C
  G         | | | |                 T T
  G         G T G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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