The detailed information of tRNA gene sequence


Sequence ID>ENV08000984
Genome IDABMN01178865
Search identical group
Phylum/Classmarine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttttatatt
tRNA gene sequence 
GGACCTCTAGCTCAGTTGGTTAGAGCACACCGCTCATAACGGTTAGGTCCTCGGTTCGAG
TCCGAGGGGGTCCACCA
Downstream region at tRNA end position 
aataaggaga
Secondary structure (Cloverleaf model)
>ENV08000984	Met	CAT
                   t      ACCA aataaggaga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     C - G          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C   T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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