The detailed information of tRNA gene sequence


Sequence ID>ENV08000988
Genome IDABMN01187181
Search identical group
Phylum/Classmarine metagenome; viral fraction from water below the boundary layer (eg, crevices and benthic surfaces) of Fanning (Tabuaeran; Northern Line Islands)
Species
Start position on genome 3
End posion on genome 79
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnta
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTCAGAGCACCCCGCTCATAACGGGATGGTCCTCGGTTCAAG
CCCGAGAGAGCCCACCA
Downstream region at tRNA end position 
tttcaataaa
Secondary structure (Cloverleaf model)
>ENV08000988	Met	CAT
                   a      ACCA tttcaataaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          C G
                    T     G A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    C   A
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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