The detailed information of tRNA gene sequence


Sequence ID>ENV08001013
Genome IDABMO01020826
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 21
End posion on genome 92
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position
ataatagaat
tRNA gene sequence
GTGTCTGTAACCTAATTGGGAAGGTGTCTGTTTTCGGAATAGGCAATAAGGGTTCGAGCC
CCTTTGGGCATTgtg
Downstream region at tRNA end position
ttttatgaat
Secondary structure (Cloverleaf model)
>ENV08001013	Arg	TCG
                   t      Tgtg ttttatgaat
                     G + T
                     T - A
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          C G
                    T     T T C C C     A
      T A A        A      | | | | |     G
    T       T C C A       A A G G G     C
    G       | | | |                 T T
    G       A G G T
      G A          G     CAAT
                    T + G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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