The detailed information of tRNA gene sequence


Sequence ID>ENV08001015
Genome IDABMO01021795
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 37
End posion on genome 111
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
taattctaaA
tRNA gene sequence 
GAACTGGTAGCTTAAGGGGTGAAGCTTATTGCTCATAACAATAAAAAAGTTGGTTCGATT
CCAATTCAGTTTTTtt
Downstream region at tRNA end position 
gggagtcggt
Secondary structure (Cloverleaf model)
>ENV08001015	Pseudo	CAT
                   A      TTtt gggagtcggt
                     G + T
                     A - T
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T A A C C     A
      G A A        A      + | | | |     G
    G       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T G          T     AAAAA
                    T - A
                    A - T
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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