The detailed information of tRNA gene sequence


Sequence ID>ENV08001020
Genome IDABMO01025519
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 48
End posion on genome 120
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
aggcaggtaa
tRNA gene sequence
CAGCGTTTAACTCAATTGGTAGAGTGTTGTGTTTACGCCACAAAAGTTGAAAGTTCGATT
CTTTTAGCGCTGAtag
Downstream region at tRNA end position
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001020	Val	TAC
                   a      Atag cnnnnnnnnn
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     T + G
                     T - A          T T
                    T     T T T T C     A
      T A A        A      + | | | |     G
    T       C T C A       G A A A G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTT
                    T - A
                    T - A
                    G - C
                    T - A
                    G - C
                  T       C
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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