The detailed information of tRNA gene sequence


Sequence ID>ENV08001028
Genome IDABMO01030327
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 116
End posion on genome 45
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnntagaat
tRNA gene sequence 
GTGTCTGTAACCTAATTGGGAAGGTGTCTGTTTTCGGAATAGGCAATAAGGGTTCGAGCC
CCTTTGGGCATTgtg
Downstream region at tRNA end position 
ttttatgaat
Secondary structure (Cloverleaf model)
>ENV08001028	Arg	TCG
                   t      Tgtg ttttatgaat
                     G + T
                     T - A
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          C G
                    T     T T C C C     A
      T A A        A      | | | | |     G
    T       T C C A       A A G G G     C
    G       | | | |                 T T
    G       A G G T
      G A          G     CAAT
                    T + G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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