The detailed information of tRNA gene sequence


Sequence ID>ENV08001030
Genome IDABMO01030509
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 103
End posion on genome 20
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position
ctgatggtgt
tRNA gene sequence
GGAAGGGTGACAGAGGGGTCTATTGTGTCTGTTTTGAAAACAGAGGCCAGAAATGGTTCG
TGGGTTCGAATCTCACCCCTTCTTttt
Downstream region at tRNA end position
aagtcttaat
Secondary structure (Cloverleaf model)
>ENV08001030	Pseudo	TGA
                   t      Tttt aagtcttaat
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      G G A        G      | | | + |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      C T A        G     GGCCAGAAATGGTTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK