The detailed information of tRNA gene sequence


Sequence ID>ENV08001031
Genome IDABMO01030814
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 10
End posion on genome 85
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
taattctaaA
tRNA gene sequence 
GAACTGGTAGCTTAAGGGGTGAAGCTTATTGCTCATAACAATAAAAAAAGTTGGTTCGAT
TCCAATTCAGTTTTTtg
Downstream region at tRNA end position 
ggatcggatt
Secondary structure (Cloverleaf model)
>ENV08001031	Pseudo	CAT
                   A      TTtg ggatcggatt
                     G + T
                     A - T
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T A A C C     A
      G A A        A      + | | | |     G
    G       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T G          T     AAAAAA
                    T - A
                    A - T
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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