The detailed information of tRNA gene sequence


Sequence ID>ENV08001034
Genome IDABMO01032783
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 20
End posion on genome 103
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
ctgatggtgt
tRNA gene sequence 
GGAAGGGTGACAGAGGGGTCTATTGTGTCTGTTTTGAAAACAGAGGCCAGAAATGGTTCG
TGGGTTCGAATCTCACCCCTTCTTttt
Downstream region at tRNA end position 
aagtcttaat
Secondary structure (Cloverleaf model)
>ENV08001034	Pseudo	TGA
                   t      Tttt aagtcttaat
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      G G A        G      | | | + |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      C T A        G     GGCCAGAAATGGTTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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