The detailed information of tRNA gene sequence


Sequence ID>ENV08001038
Genome IDABMO01038108
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 29
End posion on genome 117
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
acactcgcat
tRNA gene sequence 
GCTCGGGTGGTGGAATTGGTAGACACGACAGACTTAAAATCTGTTGAACCGAACGGTTCG
TGCGGGTTCGAGCCCCGCCCCGAGTACAA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001038	Leu	TAA
                   t      ACAA aannnnnnnn
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          C G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAACCGAACGGTTCGT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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