The detailed information of tRNA gene sequence


Sequence ID>ENV08001042
Genome IDABMO01041053
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 10
End posion on genome 83
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
attattgaaA
tRNA gene sequence 
TGTGGAGTTGACTAAGGGTTGGTCGCCAGGTTCATCCCCTGGACTATGTAGGTTCGACTC
CTACCTCCACTTGaa
Downstream region at tRNA end position 
aattaatagg
Secondary structure (Cloverleaf model)
>ENV08001042	Pseudo	CAT
                   A      TGaa aattaatagg
                     T   T
                     G - C
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     C A T C C     A
        A A        T      | | | | |     G
      G     T C A G       G T A G G     C
      G     + | | |                 T T
      G     G G T C
        T T        G     ACTAT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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