The detailed information of tRNA gene sequence


Sequence ID>ENV08001044
Genome IDABMO01041751
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 14
End posion on genome 87
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
aaattctaaA
tRNA gene sequence 
GAACTGGTAGCTTAACGGGTGAAGCTTATTGCTCATAACAATAAAAAGTTGGTTCGATTC
CAATTCAGTTTTTgg
Downstream region at tRNA end position 
gatcggtatt
Secondary structure (Cloverleaf model)
>ENV08001044	Pseudo	CAT
                   A      TTgg gatcggtatt
                     G + T
                     A - T
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T          T T
                    T     T A A C C     A
      C A A        A      + | | | |     G
    G       T T C G       G T T G G     C
    G       | | | |                 T T
    G       A A G C
      T G          T     AAAA
                    T - A
                    A - T
                    T - A
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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