The detailed information of tRNA gene sequence


Sequence ID>ENV08001048
Genome IDABMO01043340
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 95
End posion on genome 24
Amino Acid Pseudo
Anticodon GTA
Upstream region at tRNA start position 
taagcccgcc
tRNA gene sequence 
GGTATGGTGGCAGAAAGGTTATGTGTTCCGCTGTAACCGGAATTTAAGAGAGTTCGATTC
TCTTTCATGCCAtgt
Downstream region at tRNA end position 
gagtttatta
Secondary structure (Cloverleaf model)
>ENV08001048	Pseudo	GTA
                   c      Atgt gagtttatta
                     G - C
                     G - C
                     T + G
                     A - T
                     T - A
                     G - C
                     G + T          T T
                    T     T T C T C     A
        A A        G      + | | | |     G
      A     G A C G       G A G A G     C
      G       | | +                 T T
      G     A T G T
        T T        G     TTTAA
                    T - A
                    T - A
                    C - G
                    C - G
                    G - C
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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