The detailed information of tRNA gene sequence


Sequence ID>ENV08001072
Genome IDABMO01062517
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 87
End posion on genome 17
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
ggcgagcnca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
ttgggtaaaa
Secondary structure (Cloverleaf model)
>ENV08001072	Pseudo	CAT
                   a      Cttt ttgggtaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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