The detailed information of tRNA gene sequence


Sequence ID>ENV08001082
Genome IDABMO01067196
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 13
End posion on genome 83
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
ggcgagctca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGAGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position 
tgggtaaaag
Secondary structure (Cloverleaf model)
>ENV08001082	Pseudo	CAT
                   a      Cttt tgggtaaaag
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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