The detailed information of tRNA gene sequence


Sequence ID>ENV08001086
Genome IDABMO01070670
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 99
End posion on genome 29
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position
ggcgagctca
tRNA gene sequence
TGTAGAGAGGACGAATGGTGAGTCATCGGGATCATGCTCCGAAGAAGTGGGTTCGATTCC
CACCTCTACACttt
Downstream region at tRNA end position
tgggtaaaaa
Secondary structure (Cloverleaf model)
>ENV08001086	Pseudo	CAT
                   a      Cttt tgggtaaaaa
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
        A A        G      | | | | |     G
      T     G C A G       G T G G G     C
      G       | | |                 T T
      G     A G T C
        T G        A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  A       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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