The detailed information of tRNA gene sequence


Sequence ID>ENV08001088
Genome IDABMO01071439
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 101
End posion on genome 29
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aggtatatgt
tRNA gene sequence 
GCGAGAGTAGCTTAGATGGTAGAGCGTGGGTTTGTGGTGCCAGAGGTCAAGAGTTCGAGT
CTCTTTTTTCGCCttt
Downstream region at tRNA end position 
tttgttaagc
Secondary structure (Cloverleaf model)
>ENV08001088	His	GTG
                   t      Cttt tttgttaagc
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     A - T
                     G + T          T G
                    T     T T C T C     A
      A G A        A      | | | | |     G
    T       T T C G       A A G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T + G
                    G   A
                    G - C
                    G - C
                    T + G
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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