The detailed information of tRNA gene sequence


Sequence ID>WENV183740255
Genome IDPJUF01000852
Search identical group
Phylum/Class[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
Species
Start position on genome 11647
End posion on genome 11738
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcggcctgcc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAATCGTCGTACCCTGTAAGGGG
TACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gaattcccat
Secondary structure (Cloverleaf model)
>WENV183740255	Ser	GCT
                   c      GCCA gaattcccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACCCTGTAAGGGGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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