The detailed information of tRNA gene sequence


Sequence ID>ENV08001093
Genome IDABMO01074282
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 30
End posion on genome 100
Amino Acid Pseudo
Anticodon TCT
Upstream region at tRNA start position 
tagtaatttc
tRNA gene sequence 
ATCTCATTAGCTTAATGGTAAAGCAAAATACTTCTAATATTTGTATTCTAGTTCGATTCT
GGAATGAGATTgta
Downstream region at tRNA end position 
gagtttaaan
Secondary structure (Cloverleaf model)
>ENV08001093	Pseudo	TCT
                   c      Tgta gagtttaaan
                     A - T
                     T - A
                     C - G
                     T - A
                     C - G
                     A - T
                     T - A          T T
                    T     A G G T C     A
        A A        A      | | + | |     G
      T     T T C G       T C T A G     C
      G     | | | |                 T T
      G     A A G C
        T A        A     GTAT
                    A - T
                    A - T
                    A - T
                    T - A
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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