The detailed information of tRNA gene sequence


Sequence ID>WENV183740380
Genome IDPJUF01001530
Search identical group
Phylum/Class[PJUF] feces metagenome; Chicken feces (3) enriched on wood chips
Species
Start position on genome 11362
End posion on genome 11286
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttcatcaga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
gaattcgaag
Secondary structure (Cloverleaf model)
>WENV183740380	fMet	CAT
                   a      ACCA gaattcgaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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