The detailed information of tRNA gene sequence


Sequence ID>ENV08001115
Genome IDABMO01104512
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 19
End posion on genome 89
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtacctttag
tRNA gene sequence 
AGAAGATTAGGTTAGTGGTAGACCAAGGGCCTTCAAAGTTTTAAGCGTTTGTTCGATTCC
AGCATCTTCTGggt
Downstream region at tRNA end position 
tgggagtatg
Secondary structure (Cloverleaf model)
>ENV08001115	SeC	TCA
                   g      Gggt tgggagtatg
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    T     C G A C C     A
        G A        A      | + |   |     G
      T     T T G G       G T T T G     C
      G     + | | |                 T T
      G     G A C C
        T A        A     AAGC
                    A - T
                    G + T
                    G + T
                    G + T
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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