The detailed information of tRNA gene sequence


Sequence ID>ENV08001116
Genome IDABMO01104669
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 103
End posion on genome 31
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnggtaa
tRNA gene sequence 
CAGCGTTTAACTCAATTGGTAGAGTGTTGTGTTTACGCCACAAAAGTTGAAAGTTCGATT
CTTTTAGCGCTGAtag
Downstream region at tRNA end position 
ctagcataat
Secondary structure (Cloverleaf model)
>ENV08001116	Val	TAC
                   a      Atag ctagcataat
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     T + G
                     T - A          T T
                    T     T T T T C     A
      T A A        A      + | | | |     G
    T       C T C A       G A A A G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTT
                    T - A
                    T - A
                    G - C
                    T - A
                    G - C
                  T       C
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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