The detailed information of tRNA gene sequence


Sequence ID>ENV08001122
Genome IDABMO01113413
Search identical group
Phylum/ClassCoral metagenome; microbial fraction from Porites astreoides tissues; contains sequences from fungi (presumably spores), bacteria, viruses, and the coral mitochondria
Species
Start position on genome 73
End posion on genome 2
Amino Acid Pseudo
Anticodon CAT
Upstream region at tRNA start position 
ggcgagctca
tRNA gene sequence 
TGTAGAGAGGACGAATGGTGACGTCATCGGGCTCATGCTCCGAAGAAGTGGGTTCGATTC
CCACCTCTACACtnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001122	Pseudo	CAT
                   a      Ctnn nnnnnnnnnn
                     T - A
                     G - C
                     T - A
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    A     C A C C C     A
      T A A        G      | | | | |     G
    G       G C A G       G T G G G     C
    G       | | | |                 T T
    T       C G T C
      G A          A     AGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       C
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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