The detailed information of tRNA gene sequence


Sequence ID>WENV183746561
Genome IDPOYE01011079
Search identical group
Phylum/Class[POYE] biofilm metagenome; steel pipe from biofilm reactor
Species
Start position on genome 331
End posion on genome 423
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atccaagagt
tRNA gene sequence 
GGAGGCGAACGGGGTCTGGTGGCCCTCCTGGTCTTCAAAACCAGCGGTACGCCAACAGCG
TACGGTGGGTTCGATTCCCATCCGCTTCCGCCA
Downstream region at tRNA end position 
acgcaatctc
Secondary structure (Cloverleaf model)
>WENV183746561	SeC	TCA
                   t      GCCA acgcaatctc
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     A   C          T T
                    A     T A C C C     A
      T C T        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     CGGTACGCCAACAGCGTACG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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